
Connect Shopify and Intuit Enterprise Suite to the Synder app.
Personalize Synder to align perfectly with your business needs.
Enjoy streamlined bookkeeping and smooth reconciliation.

Account for all Shopify stores across Intuit Enterprise Suite through a single Synder integration. Different stores can be assigned to separate entities or dimensions, with consolidated reporting and support for intercompany inventory transfers when stock moves between entities.
Organize Shopify transactions across up to 20 dimensions beyond basic classes. Group sales by channel, store, product, payment gateway, customer type, or department to clearly understand Shopify revenue and profitability.
Separate Shopify Payments, PayPal, Stripe, and other gateways so fees, payouts, and chargebacks are tracked independently. Use dedicated clearing accounts per payment method and allocate payments across entities for clean reconciliation and clear visibility by gateway.
Keep inventory quantities and cost of goods sold in sync across stores and entities. Update inventory automatically per transaction, calculate COGS by product or variant, and support multi-location stock, bundles, and entity-specific product mapping.
Cut month-end close from days to hours by automating Shopify reconciliation across entities. Match payouts to bank deposits, reconcile clearing accounts by entity, and automatically record fees, refunds, discounts, and shipping income in one streamlined process.

To find the best solution for your business, book a call with our accounting automation expert. We'll dive into your needs and show how Synder can optimize your bookkeeping processes. Let us walk you through it!


Discover how to boost your online and subscription-based clients' success while saving time and increasing accuracy.
Explore accountants’ pageSOC 2 Type 2 certified, GDPR and HIPAA compliant, with end-to-end encryption built in. Synder keeps your data secure, helps you pass audits, and scales safely as you grow.
Synder's support team knows ecommerce accounting inside and out. Get help whenever you need it - chat, email, video call, or screen share. You're never stuck sorting things out alone.
Set up transactions exactly how you need them: rename line items, pull in custom data, adjust tax codes, and map everything to match your workflow perfectly.
Synder breaks down revenue by product, location, payment method, or date, from monthly snapshots to year-end reports. Get the data you need to make decisions.
"Synder helped us automate what was previously a very manual process. Instead of having to manually duplicate information between Shopify and QuickBooks, we can now focus on adding products to one system and let Synder handle the rest. The customer service team has been fantastic, they were really calm and easy to work with during implementation, and I really appreciate the monthly reporting emails and alerts when something doesn't sync properly. Overall, it's been a real breakthrough for keeping our books clean and our team focused on serving customers.”

Yes. Synder integrates with Intuit Enterprise Suite to sync Shopify sales, payments, fees, refunds, inventory changes, and related activity directly into IES. This integration supports multi-entity setup, automated reconciliation, and detailed categorization, so your Shopify data flows cleanly into your accounting and reporting.
Synder connects all Shopify stores through a single integration and routes each store’s activity to the correct entity or IES dimensions. It also supports Shopify Plus multi-store setups, consolidating reporting across entities and automating intercompany inventory transfers when stock moves between stores.
Yes. Synder applies Intuit Enterprise Suite dimensions during the Shopify sync based on rules you define. Shopify transactions can be categorized across up to 20 dimensions, such as sales channel, location, product type, payment gateway, customer segment, or department.
Synder tracks Shopify Payments, PayPal, Stripe, and other gateways separately, assigning each payment method its own clearing account, with fees, payouts, chargebacks, and refunds recorded independently. This keeps reconciliation clean and gives clear visibility into performance by gateway, even across multiple entities.
Synder handles Shopify payout reconciliation in Intuit Enterprise Suite using clearing accounts. It records transactions and their details when they occur, then matches Shopify payouts to bank deposits automatically. Each entity reconciles cleanly, while consolidated reporting keeps results aligned across the organization.
Per Transaction sync records every Shopify sale, fee, refund, and tax as individual entries with full detail, including product and customer information. Summary Sync groups Shopify activity into aggregated journal entries by day, week, month, or payout period, reducing entry volume and simplifying payout reconciliation.
Yes. Synder tracks Shopify inventory and COGS across multiple Intuit Enterprise Suite entities by syncing inventory changes per transaction and calculating COGS by product or variant. It supports multi-location inventory, entity-specific product mapping, and intercompany transfers, keeping stock levels and margins accurate across all stores and entities.
Synder records Shopify discounts, shipping charges, and taxes as separate line items when transactions sync into Intuit Enterprise Suite. Discounts are applied correctly to revenue, shipping income or expense is tracked automatically, and taxes are recorded as separate amounts instead of being bundled into payouts. Intuit Suite Enterprise Suite Shopify integration keeps revenue, margins, and tax reporting accurate across entities.