Connect PayPal and QuickBooks to the Synder app.
Personalize Synder to align perfectly with your business needs.
Enjoy streamlined bookkeeping and smooth reconciliation.
Synder connects PayPal, Shopify, Amazon, Stripe, and more to QuickBooks Online through one clean integration, keeping each payment processor separated. When PayPal is used inside Shopify, item details and SKUs are pulled directly from the store, so nothing needs to be sorted by hand.
Each payout is automatically matched to the correct bank transaction through a clearing account that mirrors PayPal’s real money flow, even in tricky cases like negative payouts, so balances always clear cleanly without manual fixes.
For businesses using PayPal as their primary payment account, Synder captures both sides. Vendor payments, mass payments, and outgoing expenses all flow into QuickBooks with proper categorization, giving you a complete PayPal account register to run reports against.
PayPal processing fees, withdrawal fees, and refund fees are all captured and mapped to the right expense accounts without manual entry. They're recorded as separate expense entries alongside each transaction, so your P&L reflects the true net amount.
Refunds to customers are recorded as refund receipts and linked back to the original transaction, while vendor refunds come in as deposits. Chargebacks are recorded as expenses, and if PayPal returns a fee on a refund, that's captured too.
If you're running CAD and USD storefronts, Synder applies QuickBooks exchange rates at the time of sync, since PayPal's API doesn't provide its own rates. Internal currency conversions are excluded from the sync, as they don't need to be reflected in your books.
To find the best solution for your business, book a call with our accounting automation expert. We'll dive into your needs and show how Synder can optimize your bookkeeping processes. Let us walk you through it!
Discover how to boost your online and subscription-based clients' success while saving time and increasing accuracy.
Explore accountants’ page
SOC 2 Type 2 certified, GDPR and HIPAA compliant, with end-to-end encryption built in. Synder keeps your data secure, helps you pass audits, and scales safely as you grow.
Synder's support team knows ecommerce accounting inside and out. Get help whenever you need it - chat, email, video call, or screen share. You're never stuck sorting things out alone.
Set up transactions exactly how you need them: rename line items, pull in custom data, adjust tax codes, and map everything to match your workflow perfectly.
Synder breaks down revenue by product, location, payment method, or date, from monthly snapshots to year-end reports. Get the data you need to make decisions.
"We’re saving real time with Synder. Instead of 3 or 4 hours, I now dedicate around 30–45 minutes to the task of reconciling transactions and making sure everything is perfect in our books. That’s over 70 hours saved each month, which I can now dedicate to more strategic parts of my role. The team is thrilled with the time savings and the clarity Synder provides."
%201.png){kind=icon}
