Stripe payout failure common issue 

Say, you’re closing the month and see a $15,000 payout from Stripe marked as “sent” on August 21 and record it in your accounting software. However, two days later, you find out the payout failed, meaning the funds never hit your bank. They’re still sitting in your Stripe balance, throwing off your bank reconciliation, making your Stripe clearing account look wrong, and skewing your cash flow report.

If this sounds like a problem you faced, read on, and we will show you how to resolve it using Synder.

What is a Stripe payout failure?

A payout failure occurs when Stripe attempts to transfer funds from your Stripe balance to your bank account but can’t complete the transaction. 

Common reasons include:

  • Outdated or invalid bank account details
  • Bank rejections due to account restrictions or limits
  • Currency or country mismatches
  • Compliance holds due to missing verification/KYC information

When this happens, Stripe reverses the payout and returns the funds to your Stripe balance until the problem is resolved. 

Why payout failures matter for your books

Payout failures usually happen right at settlement: the transfer to your bank is initiated, and on Stripe’s side, everything looks successful until the bank rejects it. When the payout bounces back, Stripe returns the funds and marks the payout as failed. Because it looked “good” up to that point, these failures can create a mess in your books without offsetting entries like transfer reversals.

If not handled quickly, payout failures can:

  • Disrupt bank reconciliation – Your books may show the payout as received when your bank never did.
  • Distort cash flow – Delays in payouts affect timing in reports and forecasts.
  • Cause duplicate entries – Retried payouts may be recorded twice if the failed one isn’t reversed.
  • Slow month-end close – Fixing past entries can delay reporting and require reopening closed periods.

How Synder helps

Synder lets you keep your Clearing and Checking accounts accurate when handling Stripe payout failures. 

  1. Clearing account

In Per Transaction Sync, Stripe sales and fees are posted to the Stripe (required for Synder) Clearing account you set up in Settings Sales (Accounts). 

In Summary Sync, you do the same action by going to Mapping-> Mappings list, where you set up your clearing account.

Each payout then reduces that Clearing balance via a transfer*. By syncing Stripe payout failures as separate transaction types, Synder automatically offsets these unsuccessful payouts, keeping your Clearing account accurate. 

* On Per Transaction – it’s a transfer for QuickBooks Online, QuickBooks Desktop, and Xero.

On Summary Sync – it’s a journal entry for QuickBooks Online, Sage Intacct, and Oracle NetSuite, and a bank transfer for Xero

  1. Checking account

When setting up Synder payouts in Per Transaction Sync, it’s recommended to create an asset account called Cash in Transit for Stripe, to transfer Stripe payouts from Clearing to Cash in Transit (rather than directly to Checking) until the actual payout arrives in your bank.

The same logic applies to Summary Sync: you head to Mapping-> Mappings list, where you set up your Bank to Cash in Transit for Stripe

We also advise creating a bank rule on your accounting platform’s side to transfer payouts from Cash in Transit to the Checking account once the actual money arrives in the bank. This way, your Checking account will only hold actual funds that can be reconciled with your bank statement. 

Where to find Stripe payout failure transactions in Synder

You can always search for Stripe payout failures by transaction type in your Platform Transactions (in Per Transaction Sync) or Transactions List (in Summary Sync). 

In Per Transaction Sync, Stripe failed payouts appear as a standalone “payout failure” type in Platform Transactions. 

In Summary Sync, payout failures appear in two places:

  • as a transaction in the Transactions List (similar to the one above), and
  • as a note under Info & Alerts on the Summary preview when that summary includes the failure.

What to do when you see a payout failure in Synder

Here are some steps you can take to make sure that payout failures are well managed both in terms of your clearing account and your checking account. 

Step 1. Set up your payout transfers

  • Per Transaction Sync: Set up your Stripe payouts to the Cash in Transit asset account. Then, in your accounting platform, create a bank rule to transfer the funds from Cash in Transit to Checking when the actual payout arrives in the bank.
  • Summary Sync: For Stripe integration, map your Bank to Cash in Transit for Stripe. Then, in your accounting platform, create a bank rule to transfer the funds from Cash in Transit to Checking when the actual payout arrives in the bank.

Step 2. Spot the failure

  • Summary Sync: Look for the payout failure banner in Info & Alerts.
  • Per Transaction Sync: Check your feed for “payout failure” transactions.

Step 3. Confirm in Stripe

  • Open your Stripe dashboard, go to Payouts, and review the failure reason.

Step 4. Resolve the issue

  • Update bank details, clear compliance holds, or resolve currency/account limits as needed.

Step 5. Let Stripe retry the payout

  • Stripe will retry automatically or allow you to trigger it manually. Until it succeeds, funds will stay in your Stripe balance.

Step 6. Watch your clearing balance in Synder

  • The failed payout stays recorded until the successful one arrives. No manual entry rollback is needed.

The outcome: Your balances stay accurate, your reconciliations run smoothly, and your reports remain reliable even when payouts don’t go as planned.

For more information about Stripe integrations or other Synder features, visit our Help Center or reach out to Synder Team via online support chat or email.

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